BiologicalLifeResearch
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Biological Life Research
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This page is intended to create model of biological human brain based on open research results across the world. Related findings are structured by other research themes.
Overall Brain
Biological Model
- Biological Model contains Central Nervous System (CNS), Peripheral Nervous System (PNS) and human organs, connected together and systematically described in machine-readable format
- Model data are divided into Engine Data (mind.*.xml, target.xml), Internal Model Data (hmind, muscles, nerves) and External Model Data (circuits)
- Engine Data are divided into Engine Core Data (mind.xml, mind.core.xml), Engine Lifecycle Data (mind.lifecycle.xml), Engine Speciic Data (mind.specific.xml, mind.integration.xml) and Engine Target Data (target.xml)
- see also: Biological Model Details
Brain Areas
Approach of defining areas:
- make areas functionally named and identified
- do not create thalamus area to avoid mixing unrelated paths, assign thalamus nuclei to other areas
- do not create limbic area to avoid mixing unrelated functions, assign limbic components to other areas
- take into account all subcortical nuclei and ganglia
- all areas mapped by Brodmann placed in cortical category
- consider only single left hemisphere
- consider area as set of groups of regions and links which serve similar function, with area corresponging to providing this function in several circuits (groups)
Area Code | Area Name | Type | Function | Comments |
aHuman | ||||
TSA | Target Sensory Area | target | aHuman Target Sensors | Biological Sensors |
TEA | Target Effectory Area | target | aHuman Target Effectors | Biological Motors |
Lower Brain | ||||
LLC | Locomotion Control Area | core | Learned Rythmic Movements | Locomotion Nuclei and Cerebellum |
LAC | Autonomous Control Area | lifecycle | Autonomic Nuclei and Ganglia | Nuclei to Control Autonomic Organs and Autonomic Ganglia |
LMC | Modulatory Contol Area | lifecycle | Ascending and Descending Non-Specific Modulation | Includes Nuclei Projecting Both Up and Down |
LPC | Peripheral Control Area | specific | Conscious Control of Target | Sensory Ganglia, Conscious Sensory and Motor Nuclei |
LRC | Motor Reflex Area | specific | Reflexive Motor Behavior | Nuclei of Reflex Circuits Resulting in Motor Behavior and Posture Maintenance |
Forebrain | ||||
FEC | Execution Control Area | core | Executing Motor Sequences | Premotor and Supplemental Sequences are Wrapped out via Basal Ganglia |
FAM | Affective Motivations Area | core | Aggregate Body and Mental Motivations | Merges Top Body Feeling and Sensory Streams |
FMM | Memory Management Area | core | Establish Hierarchical Memory | Top of Sensory Hierarchy |
Neocortical Brain | ||||
NMA | Motor Aggregation Area | core | Motor Hierarhical Aggregation | Wrap Out Motor Sequences to Specific Motor Steps |
NDM | Decision Making Area | core | Sensory-Drive Associations with Working Memory | Choose Actions and Create Working Memory |
NCP | Conscious Personality Area | core | Produce Mental Feeling | Handle Pain and Errors |
NSA | Sensory Aggregation Area | specific | Unimodal Sensory Aggregation | Neocortical Sensory Data and Unimodal Aggregation |
NPE | Unimodal Execution Area | specific | Initiate Polymodal Execution | Aggregate polymodal data, direct to planning and decision making |
Brain Structure Overview
(generated)
Forebrain Diencephalon (FD):
- Habenula (FAM.FD.HB)
- Hypothalamus (FD.HT)
- Retinal Nucleus (LPC.FD.RT)
- Subthalamus Area (FEC.FD.STA)
- Thalamus
- Cognitive Thalamus (FD.TH.CR)
- Motor Thalamus (FD.TH.MR)
- Sensory Thalamus (FD.TH.SR)
Forebrain Telencephalon (FT):
- Basal Ganglia (FEC.FT.BG)
- Extended Amygdala
- Amygdala (FAM.FT.AM)
- Central Extended Amygdala (FAM.FT.CEAM)
- Septal Nuclei (FAM.FT.SEP)
- Hippocampal Formation (FMM.FT.HF)
- Olfactory Nuclei (FT.OLF)
Hindbrain Myelencephalon (HL):
- Medullary Reticular Formation (HL.RF)
- Myelencephalic Motor Nuclei (HL.MN)
- Myelencephalic Parasympathetic Nuclei (HL.PSN)
- Myelencephalic Sensory Nuclei (HL.SN)
Hindbrain Metencephalon (HT):
- Cerebellar Complex (LLC.HT.CRC)
- Locus Coeruleus (LMC.HT.LC)
- Metencephalic Motor Nuclei (HT.MN)
- Metencephalic Sensory Nuclei (HT.SN)
- Pontine Reticular Formation (HT.RF)
- Pontine Tegmental Nuclei (HT.TG)
- Vestibular Nuclei (LPC.HT.VBN)
Midbrain Mesencephalon (MM):
- Mesencephalic Reticular Formation (MM.RF)
- Perhipheral Nuclei of Midbrain Mesencephalon (MM.PER)
- Periaqueductal Gray Matter (LMC.MM.PAG)
- Red Nucleus (LLC.MM.RD)
- Reflexes Nuclei of Midbrain Mesencephalon (MM.REF)
- Ventral Tegmental Area (LMC.MM.VTA)
Cerebral Cortex (NC):
- Anterior Lobe
- Anterior Cingulate Area (NC.ACG)
- Motor Cortex (NMA.NC.MC)
- Prefrontal Cortex
- Lateral Prefrontal Cortex (NC.AL.LPFC)
- Orbitomedial Prefrontal Cortex (NC.AL.OMPFC)
- Premotor Cortex (NC.PMC)
- Supplementary Motor Cortex (NMA.NC.SMC)
- Occipital Lobe (NC.LOBE.OCC)
- Parahippocampal Lobe
- Anterior Parahippocampal Gyrus
- Retrosubicular Area (FMM.NC.PHA.RS)
- Rhinal Cortex (NC.PHA.RH)
- Posterior Parahippocampal Gyrus (FMM.NC.PHP)
- Anterior Parahippocampal Gyrus
- Parietal Lobe
- Inferior Parietal Lobule (NC.IPL)
- Intraparietal Sulcus (NSA.NC.IPS)
- Medial Parietal Lobule (NC.MPL)
- Postcentral Gyrus
- Anterior Parietal Cortex (NC.PG.APC)
- Lateral Parietal Cortex (NC.PG.LPC)
- Parietal Operculum (NC.PO)
- Superior Parietal Lobule (NC.SPL)
- Temporal Lobe
- Inferotemporal Area (NSA.NC.IT)
- Insular Cortex (NC.INS)
- Superior Temporal Gyrus (NC.STG)
- Transverse Temporal Gyrus (NSA.NC.TTG)
Peripheral Nervous System (PNS):
- Parasympathetic Ganglia
- Body Parasympathetic Ganglia (PN.PSYM.BD)
- Head and Neck Parasympathetic Ganglia (PN.PSYM.HD)
- Sensory Ganglia
- Dorsal Root Ganglia (LPC.PN.SG.DRG)
- Sensory Exteroception Ganglia (PN.SG.SE)
- Sensory Interoception Ganglia (PN.SG.SI)
- Vestibular Ganglion (LPC.PN.SG.VB)
- Sympathetic Ganglia
- Paravertebral Sympathetic Ganglia (LAC.PN.SYM.PA)
- Prevertebral Sympathetic Ganglia (LAC.PN.SYM.PR)
Spinal Cord (SC):
- Anterior/Ventral Horn (SC.VH)
- Central canal (AVA.SC.CC)
- Intermediate Zone (SC.IZ)
- Lateral Horn/Funiculus (BMA.SC.LH)
- Posterior/Dorsal Horn (BMA.SC.PH)
Target (TG):
- Human Effectors
- Blood vessels (TARGET.TEA.VESSELS)
- Breast (TARGET.TEA.BREAST)
- Endocrine Glands (TARGET.TEA.ENDOCRINE)
- Face (TARGET.TEA.FACE)
- Genitalia (TARGET.TEA.GENITALIA)
- Hand (TARGET.TEA.HAND)
- Heart (TARGET.TEA.HEART)
- Immunity glands and meninges (TARGET.TEA.PROTECTOR)
- Leg (TARGET.TEA.LEG)
- Liver (TARGET.TEA.LIVER)
- Lung (TARGET.TEA.LUNG)
- Mouth feeder (TARGET.TEA.FEEDER)
- Mouth speaker (TARGET.TEA.SPEAKER)
- Neck (TARGET.TEA.NECK)
- Rectum (TARGET.TEA.RECTUM)
- Stomach (TARGET.TEA.STOMACH)
- Trunk (TARGET.TEA.TRUNK)
- Ureter (TARGET.TEA.URETER)
- Human Sensors
Circuits
(generated)